Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3503

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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251,080 + 11870 mRNA_3502 0.34 1.1
251,513 + 0.3
251,519 - -2.0
251,530 - -0.5
251,644 - -1.0
251,652 + 0.9
251,682 + 0.9
251,774 - 0.7
251,989 - -1.0
252,403 + 11871 mRNA_3503 0.23 0.4
252,430 + 11871 mRNA_3503 0.24 -1.1
252,683 + 11871 mRNA_3503 0.35 -0.0
252,733 - 11871 mRNA_3503 0.37 0.6
253,030 + 11871 mRNA_3503 0.50 1.8
253,149 + 11871 mRNA_3503 0.55 0.8
253,279 + 11871 mRNA_3503 0.60 0.2
253,586 + 11871 mRNA_3503 0.74 1.4
253,767 + 11871 mRNA_3503 0.81 -1.1
253,864 - 11871 mRNA_3503 0.85 -0.4
254,176 - -0.3
254,200 - -0.0
254,314 + 0.2
254,320 + 2.0
254,450 - 1.0
254,542 + 0.3
254,630 - -0.7
254,645 + -0.3
254,893 - -1.0
255,001 - 0.5
255,039 + -0.1
255,048 - 1.1
255,169 - 2.2