Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3392

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3391: 11759 - Hypothetical Protein, at 568755 to 569736 11759 mRNA_3392: 11760 - HMMPfam-Caffeine-induced death protein 2-PF09774, at 570084 to 570935 11760 mRNA_3393: 11761 - KOG3662 Cell division control protein/predicted DNA repair exonuclease, at 571370 to 574049 11761

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
569,180 + 11759 mRNA_3391 0.43 -0.2
569,370 + 11759 mRNA_3391 0.63 1.0
569,477 + 11759 mRNA_3391 0.74 0.5
569,477 - 11759 mRNA_3391 0.74 1.7
569,618 + 11759 mRNA_3391 0.88 0.5
569,639 - 2.1
569,780 - 1.7
569,781 + 2.0
569,791 + 1.7
569,795 - 0.4
569,799 - 1.2
569,803 + 0.9
569,814 - 0.5
569,860 - -0.2
569,864 + 0.9
569,877 + 0.9
569,987 - 2.2
570,007 - 1.1
570,108 - 0.9
570,281 - 11760 mRNA_3392 0.23 0.1
570,566 - 11760 mRNA_3392 0.57 1.5
570,838 + 11760 mRNA_3392 0.88 -0.1
570,845 + 11760 mRNA_3392 0.89 1.0
570,873 - 0.1
570,874 + 0.4
570,885 - -1.1
570,982 - 0.1
570,990 - -0.2
570,990 - 0.5
570,995 + 0.1
571,109 - -0.4
571,369 + 1.6
571,413 + -0.1
571,417 - -0.5
571,442 - 2.2
571,443 + 1.3
571,601 - 0.5
571,730 + 11761 mRNA_3393 0.13 0.9
571,901 + 11761 mRNA_3393 0.20 1.4