Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3378

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531386 to 533428 11745 mRNA_3378: 11746 - KOG1516 Carboxylesterase and related proteins, at 533955 to 535983 11746

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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533,086 + 11745 mRNA_3377 0.83 0.4
533,088 - 11745 mRNA_3377 0.83 0.7
533,089 + 11745 mRNA_3377 0.83 -0.9
533,308 - 0.3
533,453 - 1.9
533,453 - -1.5
533,524 - 1.7
533,608 - -0.4
533,990 + -0.4
534,033 - 1.2
534,080 - 1.1
534,399 - 11746 mRNA_3378 0.22 2.0
534,442 + 11746 mRNA_3378 0.24 1.2
534,647 + 11746 mRNA_3378 0.34 -0.5
534,674 - 11746 mRNA_3378 0.35 1.8
534,689 - 11746 mRNA_3378 0.36 0.2
534,847 + 11746 mRNA_3378 0.44 -0.7
534,966 - 11746 mRNA_3378 0.50 -0.0
534,990 - 11746 mRNA_3378 0.51 0.5
535,187 + 11746 mRNA_3378 0.61 0.9
535,463 - 11746 mRNA_3378 0.74 0.0
535,911 + 0.4
536,061 + 0.1
536,183 - -0.5
536,186 - -0.4
536,194 - -0.8
536,195 - 0.9
536,349 - 0.5
536,504 - -0.5
536,506 + -0.1
536,535 - -0.5
536,536 + 0.0
536,613 - 0.2
536,815 + -1.2
536,819 + 0.7
536,950 - 0.7
536,975 + 1.1