Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3372

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3371: 11739 - K13806 DAGL sn1-specific diacylglycerol lipase, at 516330 to 521387 11739 mRNA_3372: 11740 - K15103 UCP2_3, SLC25A8_9 solute carrier family 25 (mitochondrial uncoupling protein), member 8/9, at 522269 to 523428 11740 mRNA_3373: 11741 - K00390 cysH phosphoadenosine phosphosulfate reductase, at 523671 to 524664 11741

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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521,291 - -0.1
521,298 + 0.4
521,422 - 2.0
521,540 - 0.2
521,560 + 0.3
521,562 + 0.1
521,569 - 1.4
521,574 + -0.9
521,579 - 1.7
521,583 + 0.5
521,588 - 1.0
521,603 + -0.2
521,607 - -2.5
521,610 + 0.0
521,610 + -0.2
521,631 - 0.2
521,631 + 0.8
521,633 - 0.9
521,736 + -0.9
521,742 + -0.2
521,758 - 0.3
521,905 - -0.7
522,188 + 0.3
522,235 - 1.9
522,445 - 11740 mRNA_3372 0.15 -1.0
522,460 + 11740 mRNA_3372 0.16 2.0
522,777 - 11740 mRNA_3372 0.44 0.1
522,808 + 11740 mRNA_3372 0.46 -1.6
522,920 + 11740 mRNA_3372 0.56 -0.4
523,191 + 11740 mRNA_3372 0.79 0.2
523,195 - 11740 mRNA_3372 0.80 1.6
523,354 + 0.2
523,536 - 1.8
523,774 - 11741 mRNA_3373 0.10 0.3
524,099 - 11741 mRNA_3373 0.43 -1.6
524,118 - 11741 mRNA_3373 0.45 -1.1
524,133 + 11741 mRNA_3373 0.46 -1.7