Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3371

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3370: 11738 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 513932 to 515418 11738 mRNA_3371: 11739 - K13806 DAGL sn1-specific diacylglycerol lipase, at 516330 to 521387 11739 mRNA_3372: 11740 - K15103 UCP2_3, SLC25A8_9 solute carrier family 25 (mitochondrial uncoupling protein), member 8/9, at 522269 to 523428 11740

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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515,473 + 1.8
515,483 + -1.5
515,485 + 2.1
515,505 + 0.5
515,526 + -0.6
515,583 - -0.2
515,593 + 1.9
515,611 - 0.5
515,638 - 1.1
515,639 - 1.3
515,639 - 1.2
515,642 + 0.9
515,642 - 2.8
515,645 + -1.0
515,647 + -0.3
515,648 + 3.8
515,648 + 0.8
515,648 + -1.6
515,652 - 1.2
515,656 - 1.7
515,658 + -0.4
515,660 + 1.4
515,667 + -0.6
515,669 + -0.1
515,674 - 0.1
515,677 - 0.3
515,677 + -0.0
515,683 + -0.0
515,690 + 0.0
515,710 + 2.6
515,729 - 0.4
515,772 - 0.7
515,875 + -0.6
515,881 - 1.0
515,881 - -0.1
515,881 + -0.7
515,881 - 1.7
515,881 - 1.4
515,882 + 0.3
515,882 - 1.1
515,896 - -0.1
515,901 + -1.3
515,902 + 0.3
515,902 + 0.0
515,905 + 2.5
515,908 - -1.0
515,914 - 1.9
515,914 + 0.9
515,914 - 0.1
515,919 + 1.8
515,920 - 1.8
515,926 + 0.1
515,935 - -0.2
515,940 + 0.6
515,941 - 1.2
515,947 - 0.9
516,164 - 0.5
516,356 - 0.2
516,369 - 0.2
516,661 - 1.1
516,901 - 11739 mRNA_3371 0.11 0.5
517,256 + 11739 mRNA_3371 0.18 1.1
517,382 + 11739 mRNA_3371 0.21 1.1
517,388 + 11739 mRNA_3371 0.21 1.3
517,606 - 11739 mRNA_3371 0.25 -0.8
517,821 + 11739 mRNA_3371 0.29 0.9
517,833 + 11739 mRNA_3371 0.30 1.6
517,950 - 11739 mRNA_3371 0.32 1.3
517,962 + 11739 mRNA_3371 0.32 -0.3
517,962 + 11739 mRNA_3371 0.32 -0.2
517,966 + 11739 mRNA_3371 0.32 1.6
518,245 - 11739 mRNA_3371 0.38 -0.6
518,271 + 11739 mRNA_3371 0.38 1.3
518,320 - 11739 mRNA_3371 0.39 1.1
518,965 + 11739 mRNA_3371 0.52 1.9
519,007 + 11739 mRNA_3371 0.53 0.7
519,188 + 11739 mRNA_3371 0.57 0.2
519,286 - 11739 mRNA_3371 0.58 -0.2
519,372 + 11739 mRNA_3371 0.60 -1.0
519,375 - 11739 mRNA_3371 0.60 -0.2
519,699 - 11739 mRNA_3371 0.67 0.5
519,811 - 11739 mRNA_3371 0.69 1.1
519,817 - 11739 mRNA_3371 0.69 2.4
519,969 - 11739 mRNA_3371 0.72 0.2
520,022 - 11739 mRNA_3371 0.73 0.2
520,043 + 11739 mRNA_3371 0.73 0.3
520,222 - 11739 mRNA_3371 0.77 1.3
520,461 - 11739 mRNA_3371 0.82 0.2
520,473 - 11739 mRNA_3371 0.82 2.7
520,563 + 11739 mRNA_3371 0.84 -0.3
520,585 + 11739 mRNA_3371 0.84 1.2
520,615 - 11739 mRNA_3371 0.85 2.0
520,712 + 11739 mRNA_3371 0.87 0.1
520,806 + 11739 mRNA_3371 0.88 -0.4
520,823 - 11739 mRNA_3371 0.89 -0.3
520,849 + 11739 mRNA_3371 0.89 0.5
520,872 - 11739 mRNA_3371 0.90 -0.1
520,945 - 0.2
520,957 + 1.3
520,959 + 0.3
520,977 + 1.2
520,978 + 0.3
521,002 + -0.4
521,081 - -0.4
521,085 + 1.1
521,108 + -0.3
521,147 + 0.5
521,154 + 1.2
521,156 + 1.8
521,209 + -0.8
521,227 + 2.6
521,259 - -0.4
521,291 - -0.1
521,298 + 0.4
521,422 - 2.0
521,540 - 0.2
521,560 + 0.3
521,562 + 0.1
521,569 - 1.4
521,574 + -0.9
521,579 - 1.7
521,583 + 0.5
521,588 - 1.0
521,603 + -0.2
521,607 - -2.5
521,610 + 0.0
521,610 + -0.2
521,631 - 0.2
521,631 + 0.8
521,633 - 0.9
521,736 + -0.9
521,742 + -0.2
521,758 - 0.3
521,905 - -0.7
522,188 + 0.3
522,235 - 1.9