Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3271

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3270: 11638 - Hypothetical Protein, at 252078 to 253678 11638 mRNA_3271: 11639 - K07126 K07126 uncharacterized protein, at 254292 to 257031 11639 mRNA_3272: 11640 - Hypothetical Protein, at 257343 to 259236 11640

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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253,322 + 11638 mRNA_3270 0.78 0.7
253,592 + -0.1
253,742 + -1.5
253,752 + 1.1
253,859 + 2.4
254,012 - -1.1
254,028 - 0.9
254,034 + -0.2
254,036 - -0.7
254,039 - 1.6
254,046 - -0.8
254,051 - 0.3
254,058 + 0.2
254,179 - 0.1
254,475 - -2.1
254,476 + 0.9
254,616 - 11639 mRNA_3271 0.12 0.8
254,621 + 11639 mRNA_3271 0.12 0.3
254,624 - 11639 mRNA_3271 0.12 -0.0
254,748 - 11639 mRNA_3271 0.17 1.2
254,758 - 11639 mRNA_3271 0.17 -0.3
254,767 + 11639 mRNA_3271 0.17 0.9
254,894 + 11639 mRNA_3271 0.22 2.7
255,073 + 11639 mRNA_3271 0.29 -0.8
255,204 - 11639 mRNA_3271 0.33 1.8
255,207 + 11639 mRNA_3271 0.33 1.5
255,352 + 11639 mRNA_3271 0.39 -0.5
256,647 - 11639 mRNA_3271 0.86 0.4
256,648 + 11639 mRNA_3271 0.86 0.7
256,796 - -0.7
257,106 + 1.7
257,245 - 1.8