Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3247

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615 mRNA_3248: 11616 - Hypothetical Protein, at 210155 to 211275 11616

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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206,716 - 11614 mRNA_3246 0.73 1.0
206,970 - 11614 mRNA_3246 0.88 -1.8
206,989 + 11614 mRNA_3246 0.89 0.1
207,159 - -0.5
207,285 - 0.7
207,317 + 0.6
207,327 - -0.6
207,356 + 0.2
207,427 - -0.7
207,605 - -0.0
207,618 - 1.4
207,634 + -0.8
207,730 + -0.7
207,734 + -0.2
207,865 - 11615 mRNA_3247 0.17 -0.9
207,926 - 11615 mRNA_3247 0.20 0.4
207,984 + 11615 mRNA_3247 0.24 1.7
208,012 + 11615 mRNA_3247 0.26 -0.1
208,307 + 11615 mRNA_3247 0.43 3.0
208,320 + 11615 mRNA_3247 0.44 0.3
208,328 + 11615 mRNA_3247 0.45 0.5
208,356 + 11615 mRNA_3247 0.46 1.5
208,471 + 11615 mRNA_3247 0.53 1.4
208,489 + 11615 mRNA_3247 0.54 -0.0
208,490 + 11615 mRNA_3247 0.54 -0.0
208,599 - 11615 mRNA_3247 0.61 -0.7
208,609 + 11615 mRNA_3247 0.62 -0.1
208,770 + 11615 mRNA_3247 0.71 0.3
208,773 - 11615 mRNA_3247 0.71 -0.4
208,930 + 11615 mRNA_3247 0.81 1.0
208,973 - 11615 mRNA_3247 0.83 -0.5
209,234 + 2.8
209,383 - 0.2
209,590 - -0.3
209,591 + -0.6
209,646 - 0.6
209,760 + -0.1
209,764 - -1.0
209,766 - 1.3
209,772 - 0.2
209,806 + -0.4
209,829 - 0.5
209,894 + 0.5
209,916 + 2.3
210,021 + 1.9
210,028 - 1.1
210,028 - 1.0
210,176 - 0.2