Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3236

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3235: 11603 - Hypothetical Protein, at 170278 to 173457 11603 mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604 mRNA_3237: 11605 - K10357 MYO5 myosin V, at 176488 to 184590 11605

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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172,724 + 11603 mRNA_3235 0.77 0.7
172,993 - 11603 mRNA_3235 0.85 1.7
173,184 + -1.0
173,847 + -1.3
173,892 - -0.8
174,169 - 11604 mRNA_3236 0.22 -5.1
174,570 - 11604 mRNA_3236 0.42 -3.8
174,593 + 11604 mRNA_3236 0.43 -3.5
175,420 + 11604 mRNA_3236 0.82 -4.1
175,721 - -2.6
175,861 - -0.3
176,024 - -1.0
176,050 + 0.0
176,179 - -0.4
176,189 - -0.2
176,190 + -0.1
176,192 + -0.2
176,192 + 2.6
176,195 + -0.0
176,198 - 1.3
176,203 + 0.1
176,209 - -0.4
176,216 - 0.2
176,319 + 2.4
176,327 + -0.5
176,329 - 1.2
176,329 - -0.8
176,335 + 0.5
176,343 + -0.1
176,345 + 0.4
176,346 - 0.5
176,347 - 0.1
176,348 + 0.0
176,350 + 1.4
176,351 - -0.0
176,361 + 1.2
176,371 + 1.7
176,379 + 0.3
176,502 - 0.9
176,510 - 1.4
176,579 - 0.4
176,615 - 1.6
176,643 + -0.2