Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3235

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3235: 11603 - Hypothetical Protein, at 170278 to 173457 11603 mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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169,622 + 1.7
169,635 + -0.0
169,873 - 0.9
170,012 + 0.6
170,072 + 1.2
170,135 - -0.1
170,183 + -0.0
170,187 + 0.3
170,188 - 0.3
170,190 - 1.3
170,193 + 0.0
170,197 + 1.2
170,200 - 1.2
170,216 - 1.3
170,220 + -0.6
170,356 + -1.3
170,476 + -0.2
170,616 + 11603 mRNA_3235 0.11 1.8
170,744 + 11603 mRNA_3235 0.15 2.2
170,770 - 11603 mRNA_3235 0.15 0.1
170,800 + 11603 mRNA_3235 0.16 -0.1
170,894 + 11603 mRNA_3235 0.19 0.1
170,954 - 11603 mRNA_3235 0.21 -0.8
171,132 + 11603 mRNA_3235 0.27 0.7
171,206 + 11603 mRNA_3235 0.29 0.6
171,473 - 11603 mRNA_3235 0.38 1.5
171,491 + 11603 mRNA_3235 0.38 0.8
171,495 - 11603 mRNA_3235 0.38 0.1
171,538 + 11603 mRNA_3235 0.40 -0.8
171,574 - 11603 mRNA_3235 0.41 -0.4
171,842 - 11603 mRNA_3235 0.49 -0.1
172,017 + 11603 mRNA_3235 0.55 0.7
172,218 + 11603 mRNA_3235 0.61 -0.5
172,268 - 11603 mRNA_3235 0.63 0.2
172,556 + 11603 mRNA_3235 0.72 -0.2
172,556 + 11603 mRNA_3235 0.72 -2.8
172,724 + 11603 mRNA_3235 0.77 0.7
172,993 - 11603 mRNA_3235 0.85 1.7
173,184 + -1.0
173,847 + -1.3
173,892 - -0.8
174,169 - 11604 mRNA_3236 0.22 -5.1