Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2908

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2907: 11275 - HMMPfam-FAD dependent oxidoreductase-PF01266,SUPERFAMILY--SSF51971, at 510278 to 512745 11275 mRNA_2908: 11276 - KOG3098 Uncharacterized conserved protein, at 512850 to 515031 11276 mRNA_2909: 11277 - Hypothetical Protein, at 515453 to 516872 11277

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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512,080 - 11275 mRNA_2907 0.73 0.4
512,083 + 11275 mRNA_2907 0.73 0.6
512,122 + 11275 mRNA_2907 0.75 -0.2
512,243 - 11275 mRNA_2907 0.80 -0.7
512,542 - -1.8
512,692 + -0.2
512,702 - 1.1
512,941 + -1.5
513,269 - 11276 mRNA_2908 0.19 -1.9
513,336 - 11276 mRNA_2908 0.22 -0.5
513,362 - 11276 mRNA_2908 0.23 1.8
513,382 + 11276 mRNA_2908 0.24 1.0
513,497 + 11276 mRNA_2908 0.30 0.4
513,531 + 11276 mRNA_2908 0.31 0.7
513,569 + 11276 mRNA_2908 0.33 -0.7
513,571 - 11276 mRNA_2908 0.33 -0.0
513,601 - 11276 mRNA_2908 0.34 0.6
513,617 - 11276 mRNA_2908 0.35 0.5
513,617 - 11276 mRNA_2908 0.35 0.4
513,624 + 11276 mRNA_2908 0.35 -0.2
513,629 - 11276 mRNA_2908 0.36 -0.4
513,631 + 11276 mRNA_2908 0.36 1.2
513,640 + 11276 mRNA_2908 0.36 -0.1
513,643 - 11276 mRNA_2908 0.36 0.2
513,680 + 11276 mRNA_2908 0.38 -1.5
513,683 - 11276 mRNA_2908 0.38 -0.5
514,285 + 11276 mRNA_2908 0.66 -0.8
514,404 + 11276 mRNA_2908 0.71 -0.1
514,659 - 11276 mRNA_2908 0.83 -1.7
514,674 + 11276 mRNA_2908 0.84 0.0
514,722 - 11276 mRNA_2908 0.86 -1.4
514,777 + 11276 mRNA_2908 0.88 -0.7
515,006 + -0.1
515,591 - -1.3
515,591 - -0.6
515,656 - 11277 mRNA_2909 0.14 0.4
515,787 + 11277 mRNA_2909 0.24 2.0