Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2898

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479604 to 482899 11265 mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
482,083 - 11265 mRNA_2897 0.75 0.1
482,400 + 11265 mRNA_2897 0.85 3.8
482,553 + 11265 mRNA_2897 0.89 1.3
482,737 + -1.0
482,761 + 0.6
483,214 + 1.1
483,340 + 0.8
483,425 + -0.4
483,430 - -0.3
483,566 - 11266 mRNA_2898 0.10 -0.1
483,572 + 11266 mRNA_2898 0.10 -0.1
483,583 - 11266 mRNA_2898 0.11 -0.3
483,706 + 11266 mRNA_2898 0.13 1.0
483,911 - 11266 mRNA_2898 0.16 2.1
483,990 + 11266 mRNA_2898 0.18 -0.0
484,433 + 11266 mRNA_2898 0.26 1.3
484,529 + 11266 mRNA_2898 0.28 -0.9
484,573 - 11266 mRNA_2898 0.29 1.5
484,584 + 11266 mRNA_2898 0.29 0.5
484,730 + 11266 mRNA_2898 0.31 0.2
484,894 + 11266 mRNA_2898 0.34 0.1
484,992 + 11266 mRNA_2898 0.36 1.8
485,157 + 11266 mRNA_2898 0.39 0.3
485,163 + 11266 mRNA_2898 0.39 -1.4
485,292 + 11266 mRNA_2898 0.42 -0.0
485,498 + 11266 mRNA_2898 0.45 0.9
485,617 + 11266 mRNA_2898 0.48 0.7
485,899 - 11266 mRNA_2898 0.53 0.2
485,902 + 11266 mRNA_2898 0.53 0.6
486,134 - 11266 mRNA_2898 0.57 0.2
486,167 - 11266 mRNA_2898 0.58 -1.1
486,513 + 11266 mRNA_2898 0.64 -0.2
486,786 - 11266 mRNA_2898 0.69 0.2
486,789 + 11266 mRNA_2898 0.69 1.9
486,950 + 11266 mRNA_2898 0.72 0.8
487,069 + 11266 mRNA_2898 0.74 0.6
487,357 + 11266 mRNA_2898 0.79 -0.7
487,501 + 11266 mRNA_2898 0.82 0.1
487,716 - 11266 mRNA_2898 0.86 -0.2
487,813 - 11266 mRNA_2898 0.87 -0.2
487,989 - 1.0
488,154 + -0.1
488,224 - 0.7
488,235 - -0.0
488,262 + -0.2
488,372 - 0.1
488,389 + 1.7
488,506 - 1.0
488,521 + 0.8
488,534 + -3.0
488,556 + 2.1
488,650 - 0.7
488,712 - -0.2
488,719 + 0.3
488,766 + -0.3
488,806 + -0.0
488,807 - -0.9
488,935 - 0.3
488,937 + -0.4
488,969 - 1.0
488,970 + -0.1
488,997 + 0.8
489,000 + 2.2
489,038 - 0.2