Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2772

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175827 to 177001 11139 mRNA_2772: 11140 - SUPERFAMILY--SSF56112, at 177192 to 178295 11140 mRNA_2773: 11141 - K02953 RP-S13e, RPS13 small subunit ribosomal protein S13e, at 178817 to 179625 11141

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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176,203 - 11139 mRNA_2771 0.32 0.3
176,204 - 11139 mRNA_2771 0.32 0.8
176,771 - 11139 mRNA_2771 0.80 -0.9
177,068 + -0.3
177,259 - -0.3
177,515 - 11140 mRNA_2772 0.29 -0.2
177,566 - 11140 mRNA_2772 0.34 -0.5
177,662 - 11140 mRNA_2772 0.43 0.4
177,827 + 11140 mRNA_2772 0.58 0.3
177,832 - 11140 mRNA_2772 0.58 -0.1
177,869 - 11140 mRNA_2772 0.61 1.4
177,974 + 11140 mRNA_2772 0.71 0.0
178,242 + -1.4
178,296 + -0.3
178,417 - -0.0
178,586 - -3.9