Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2718

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2717: 11085 - HMMPfam-Nitronate monooxygenase-PF03060,SUPERFAMILY--SSF51412, at 71439 to 72597 11085 mRNA_2718: 11086 - SUPERFAMILY--SSF50475, at 72649 to 73814 11086 mRNA_2719: 11087 - Hypothetical Protein, at 74043 to 75833 11087

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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71,843 - 11085 mRNA_2717 0.35 -1.7
71,952 + 11085 mRNA_2717 0.44 -0.5
72,350 + 11085 mRNA_2717 0.79 0.3
72,407 - 11085 mRNA_2717 0.84 0.7
72,468 - 11085 mRNA_2717 0.89 -0.2
72,536 + -0.2
72,536 + -0.9
72,547 - -0.1
72,556 + -0.3
72,563 + 2.0
72,669 + -0.2
72,837 - 11086 mRNA_2718 0.16 0.2
72,882 + 11086 mRNA_2718 0.20 0.4
72,887 + 11086 mRNA_2718 0.20 0.1
72,887 + 11086 mRNA_2718 0.20 1.9
73,025 + 11086 mRNA_2718 0.32 -0.8
73,147 + 11086 mRNA_2718 0.43 2.3
73,399 + 11086 mRNA_2718 0.64 1.9
73,415 + 11086 mRNA_2718 0.66 1.2
73,445 - 11086 mRNA_2718 0.68 -1.3
73,452 - 11086 mRNA_2718 0.69 2.5
73,538 + 11086 mRNA_2718 0.76 -0.9
73,553 - 11086 mRNA_2718 0.78 -0.2
73,583 + 11086 mRNA_2718 0.80 0.2
73,697 - 11086 mRNA_2718 0.90 0.6
73,700 - 1.4
73,718 - -0.2
73,756 + 1.0
73,827 - 0.7
73,844 + -0.5
73,989 - 0.4
73,992 + -0.9
73,996 + 0.2
73,997 + 0.1
74,005 + -0.1
74,008 - 1.1
74,011 - 0.5
74,015 - 1.7
74,023 - 0.3
74,051 - 0.1
74,074 - 1.0
74,075 + -0.8
74,079 + -0.2
74,092 + 0.5
74,094 + -0.3
74,126 + -0.1
74,184 + -0.2
74,188 + 0.0
74,236 - 11087 mRNA_2719 0.11 1.0
74,242 - 11087 mRNA_2719 0.11 -1.0
74,246 + 11087 mRNA_2719 0.11 0.3
74,250 + 11087 mRNA_2719 0.12 0.9
74,252 + 11087 mRNA_2719 0.12 0.2
74,258 + 11087 mRNA_2719 0.12 -2.2
74,265 + 11087 mRNA_2719 0.12 -0.6
74,267 + 11087 mRNA_2719 0.13 0.6
74,269 + 11087 mRNA_2719 0.13 0.3
74,390 - 11087 mRNA_2719 0.19 0.6
74,398 + 11087 mRNA_2719 0.20 1.1
74,536 - 11087 mRNA_2719 0.28 0.2
74,538 + 11087 mRNA_2719 0.28 1.1
74,562 + 11087 mRNA_2719 0.29 1.3
74,643 + 11087 mRNA_2719 0.34 -1.0