Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2661

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2660: 11028 - Hypothetical Protein, at 700726 to 702526 11028 mRNA_2661: 11029 - Interpro GDP-fucose protein O-fucosyltransferase, at 702625 to 704593 11029

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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702,007 + 11028 mRNA_2660 0.71 2.1
702,354 - 0.5
702,462 + 1.9
702,523 - -1.3
702,589 + -1.1
703,392 - 11029 mRNA_2661 0.39 0.7
703,829 + 11029 mRNA_2661 0.61 2.1
704,089 + 11029 mRNA_2661 0.74 1.3
704,094 - 11029 mRNA_2661 0.75 1.2
704,831 + -0.8
704,953 - -0.5
704,958 + -0.4
704,964 - 1.4
704,973 + -0.4
704,979 + -0.7
704,995 + 1.8
705,012 + 0.6
705,108 - -0.0
705,120 - 0.2
705,120 - 0.1
705,122 - -0.4
705,127 + 0.3
705,132 - -0.7
705,134 - 0.1
705,137 - 0.1
705,140 - -0.3
705,140 - -0.3
705,142 + 0.1
705,149 - -0.1
705,149 - -0.3
705,151 + -0.2
705,153 - 0.1
705,172 + 0.5
705,182 + 0.9
705,184 - 0.4
705,191 + 0.3
705,203 - -0.1
705,216 + 0.8
705,216 + -0.9
705,224 - 1.7
705,226 + 1.1
705,227 + 3.0
705,235 - 0.3
705,238 - -0.3
705,240 + 0.1
705,243 + 0.2
705,244 + 0.6
705,249 + 0.2
705,252 + -0.1
705,254 - -0.1
705,257 + -0.2
705,315 + 1.3
705,342 + 0.6
705,347 - 0.0
705,354 + 3.5
705,354 + 0.1
705,363 - 1.6
705,373 - 1.3
705,379 - -0.7
705,380 - -0.2
705,386 - 0.6
705,388 - 0.5
705,394 + 1.6
705,402 - 0.4
705,436 + 0.5
705,439 + -0.7
705,441 - 1.5
705,448 + 1.0
705,455 - 0.4
705,464 + 0.1
705,489 - -1.4
705,499 - -0.4
705,508 + 0.0
705,512 - 1.5
705,513 - 0.3
705,515 - 0.3
705,516 - 0.7
705,520 - 2.5
705,524 + 0.3
705,530 + 0.1
705,530 + 0.8
705,531 - -0.3
705,532 + -0.3
705,533 + 2.1
705,534 + 0.4
705,536 + 0.2
705,540 - -0.1
705,541 - 0.7
705,543 - 0.8
705,545 - 0.4
705,546 - 0.4
705,548 + 0.1
705,551 - -1.3
705,552 + 0.3
705,553 + 0.2
705,556 - 0.4
705,561 + -0.2
705,562 + -0.3
705,563 - 0.7
705,564 + 2.4
705,565 + -0.0
705,569 + 0.3
705,569 + 0.4
705,576 - 0.6
705,582 - -0.4
705,588 - -0.6
705,592 + 2.0