Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2660

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2659: 11027 - Hypothetical Protein, at 699650 to 700523 11027 mRNA_2660: 11028 - Hypothetical Protein, at 700726 to 702526 11028 mRNA_2661: 11029 - Interpro GDP-fucose protein O-fucosyltransferase, at 702625 to 704593 11029

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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699,737 + -0.1
699,747 - 11027 mRNA_2659 0.11 1.6
699,831 - 11027 mRNA_2659 0.21 0.1
699,931 + 11027 mRNA_2659 0.32 1.0
699,933 - 11027 mRNA_2659 0.32 0.9
699,973 + 11027 mRNA_2659 0.37 0.0
700,124 - 11027 mRNA_2659 0.54 0.4
700,125 + 11027 mRNA_2659 0.54 0.5
700,259 + 11027 mRNA_2659 0.70 -1.3
700,399 - 11027 mRNA_2659 0.86 0.4
700,410 - 11027 mRNA_2659 0.87 0.3
700,552 + 0.8
700,554 - 0.0
700,569 + 0.0
700,572 - 0.4
700,694 - 1.2
700,710 - 0.9
700,714 - 0.4
700,827 - -0.3
700,864 + 2.5
700,880 - 2.2
700,890 + 0.5
701,605 + 11028 mRNA_2660 0.49 0.9
702,007 + 11028 mRNA_2660 0.71 2.1
702,354 - 0.5
702,462 + 1.9
702,523 - -1.3
702,589 + -1.1
703,392 - 11029 mRNA_2661 0.39 0.7