Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2650

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2650: 11018 - BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa], at 676679 to 679842 11018 mRNA_2651: 11019 - Hypothetical Protein, at 680407 to 680751 11019

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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675,695 - -0.2
675,695 - -0.6
675,709 + -0.3
675,744 - 1.5
675,967 + -0.3
675,970 + 0.1
675,987 + -0.7
675,990 - -0.4
676,092 - 0.4
676,102 + -1.0
676,131 + -0.5
676,234 + -1.2
676,246 - -0.3
676,250 - 0.9
676,253 - -0.2
676,397 - 1.4
676,406 + -1.3
676,555 - 0.6
676,703 + 0.1
676,706 - 1.5
676,717 - -1.0
677,025 + 11018 mRNA_2650 0.11 0.9
677,025 + 11018 mRNA_2650 0.11 1.3
677,435 + 11018 mRNA_2650 0.24 0.0
677,614 - 11018 mRNA_2650 0.30 0.4
677,852 - 11018 mRNA_2650 0.37 2.0
677,927 - 11018 mRNA_2650 0.39 -0.3
677,954 + 11018 mRNA_2650 0.40 -0.3
677,991 - 11018 mRNA_2650 0.41 -0.3
677,991 - 11018 mRNA_2650 0.41 0.9
678,230 + 11018 mRNA_2650 0.49 -3.7
678,269 + 11018 mRNA_2650 0.50 0.9
678,452 + 11018 mRNA_2650 0.56 1.4
678,453 + 11018 mRNA_2650 0.56 1.2
678,506 - 11018 mRNA_2650 0.58 -0.1
678,514 + 11018 mRNA_2650 0.58 -1.5
678,596 + 11018 mRNA_2650 0.61 -0.7
678,830 - 11018 mRNA_2650 0.68 1.4
678,844 - 11018 mRNA_2650 0.68 -0.4
678,870 + 11018 mRNA_2650 0.69 1.7
679,001 + 11018 mRNA_2650 0.73 0.9
679,004 - 11018 mRNA_2650 0.73 -0.0
679,034 - 11018 mRNA_2650 0.74 -1.2
679,149 + 11018 mRNA_2650 0.78 1.4
679,362 - 11018 mRNA_2650 0.85 -0.2
679,445 + 11018 mRNA_2650 0.87 1.2
679,561 - 0.4
679,584 + -0.5
679,887 - -0.3
679,901 + -1.0
680,298 - 0.7
680,371 - 1.1
680,375 - -0.0
680,473 - 11019 mRNA_2651 0.19 -0.9
680,507 - 11019 mRNA_2651 0.29 -0.0
680,610 + 11019 mRNA_2651 0.59 -0.4
680,776 + 0.2
680,782 + -0.3