Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2564

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2563: 10931 - Interpro F-box-like, at 454095 to 455181 10931 mRNA_2564: 10932 - SUPERFAMILY--SSF52058, at 455625 to 456615 10932 mRNA_2565: 10933 - K00799 GST, gst glutathione S-transferase, at 457320 to 458239 10933

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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454,635 - 10931 mRNA_2563 0.50 1.1
455,084 + -1.2
455,318 - 1.0
455,493 - 2.3
455,518 + 0.2
455,622 - 0.6
455,780 + 10932 mRNA_2564 0.16 1.2
456,085 - 10932 mRNA_2564 0.46 0.9
456,190 + 10932 mRNA_2564 0.57 0.4
456,229 + 10932 mRNA_2564 0.61 -0.4
456,249 + 10932 mRNA_2564 0.63 0.1
456,381 + 10932 mRNA_2564 0.76 0.6
456,526 + 1.0
456,822 - -0.5
456,846 + 1.0
456,975 - -0.2
457,134 + 0.1
457,153 + 1.9
457,157 + 0.5
457,430 + 10933 mRNA_2565 0.12 0.1
457,540 + 10933 mRNA_2565 0.24 0.3
457,576 - 10933 mRNA_2565 0.28 -0.8