Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2551

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425175 to 426192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426245 to 427122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428082 to 428710 10920

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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425,284 - 10918 mRNA_2550 0.11 0.3
425,287 - 10918 mRNA_2550 0.11 0.8
425,296 + 10918 mRNA_2550 0.12 -0.4
425,438 - 10918 mRNA_2550 0.26 1.1
425,440 - 10918 mRNA_2550 0.26 -0.6
425,720 - 10918 mRNA_2550 0.54 0.0
425,726 + 10918 mRNA_2550 0.54 1.1
425,981 - 10918 mRNA_2550 0.79 -0.2
426,130 - 1.0
426,161 + -0.5
426,599 - 10919 mRNA_2551 0.40 0.9
426,608 + 10919 mRNA_2551 0.41 1.7
426,891 + 10919 mRNA_2551 0.74 0.0
427,455 + 0.6
427,482 - 0.2
427,493 - 1.8
427,494 - -0.1
427,507 + 0.6
427,516 - 0.4
427,625 - -0.5
427,744 - -2.0
427,756 - -0.1
427,756 - 0.4
427,761 + 1.5
427,779 - 0.2
427,783 - 1.5
427,795 + -0.6
428,026 + -0.4
428,040 + 0.2
428,086 + 1.2
428,105 - 0.3
428,121 - 1.3