Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2502

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2501: 10869 - K00852 rbsK, RBKS ribokinase, at 301795 to 303224 10869 mRNA_2502: 10870 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 303475 to 306650 10870 mRNA_2503: 10871 - SUPERFAMILY--SSF63829, at 307178 to 308891 10871

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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302,896 + 10869 mRNA_2501 0.77 -0.7
303,033 + 10869 mRNA_2501 0.87 2.3
303,064 - 10869 mRNA_2501 0.89 1.0
303,386 + 1.6
303,454 - 0.1
303,504 + 1.2
304,082 - 10870 mRNA_2502 0.19 -0.2
304,362 + 10870 mRNA_2502 0.28 0.4
304,378 - 10870 mRNA_2502 0.28 3.3
304,843 - 10870 mRNA_2502 0.43 2.0
305,384 - 10870 mRNA_2502 0.60 0.7
305,389 + 10870 mRNA_2502 0.60 -0.1
305,669 - 10870 mRNA_2502 0.69 1.1
305,817 + 10870 mRNA_2502 0.74 2.0
305,825 + 10870 mRNA_2502 0.74 0.6
305,835 - 10870 mRNA_2502 0.74 1.1
305,947 - 10870 mRNA_2502 0.78 1.4
305,986 + 10870 mRNA_2502 0.79 0.7
306,151 + 10870 mRNA_2502 0.84 0.8
306,308 - 10870 mRNA_2502 0.89 0.9
306,310 + 10870 mRNA_2502 0.89 -0.8
306,316 - 10870 mRNA_2502 0.89 -0.2
306,318 - 10870 mRNA_2502 0.90 0.6
306,511 + -1.9
306,570 - 1.0
306,591 - 0.7
306,593 - -0.2
306,594 - -1.0
306,595 + -0.2
306,609 - 0.6
306,611 + 0.2
306,717 - 0.8
306,728 - 1.4
306,734 - 1.6
306,750 + 1.7
306,801 - -0.8
306,818 - -1.5
306,824 + 1.5
306,841 + 0.9
306,847 - 0.4
306,851 - -0.1
306,852 - -0.6
306,856 - 1.1
306,884 - 1.7
306,887 - 0.9
306,887 - -0.4
306,895 + -2.3
306,904 - 1.3
306,982 + 0.9
306,987 - 0.3
306,996 + -0.3
306,998 - 1.7
306,999 + -0.0
307,008 + 1.0
307,021 + 0.3
307,046 - -1.6
307,058 - 2.6
307,063 - 1.2
307,073 - 0.3
307,077 - 1.7
307,081 + 0.7
307,125 - -0.6
307,143 - 0.8
307,149 + 0.6
307,196 + -0.5
307,197 + 0.8
307,199 + 1.2
307,206 - -0.5
307,208 + -0.6
307,208 + 1.4
307,211 + 0.5
307,212 - 0.5
307,222 - -0.6
307,233 + -0.0
307,235 - 0.1
307,238 + 1.7
307,247 + 1.2
307,252 + 0.6
307,253 - -0.5
307,255 - 0.3
307,328 - -0.9