Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2494

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2493: 10861 - KOG3098 Uncharacterized conserved protein, at 279372 to 281338 10861 mRNA_2494: 10862 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 281884 to 283232 10862 mRNA_2495: 10863 - K03507 DPB11 DNA replication regulator DPB11, at 283554 to 287606 10863

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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281,145 + -1.9
281,184 + 1.0
281,300 - -0.4
281,350 - 0.4
281,457 + -0.2
281,461 + -0.8
281,472 - 0.5
281,596 - -0.3
281,599 - -0.6
281,602 + 0.6
281,603 - 1.3
281,610 + 1.8
281,623 - 1.2
281,627 + 0.9
281,635 - -1.4
281,772 - -0.2
281,792 + 0.3
282,024 - 10862 mRNA_2494 0.10 1.2
282,035 - 10862 mRNA_2494 0.11 -0.4
282,052 + 10862 mRNA_2494 0.12 1.2
282,207 + 10862 mRNA_2494 0.24 0.3
282,496 + 10862 mRNA_2494 0.45 -1.1
282,757 - 10862 mRNA_2494 0.65 -1.4
282,795 - 10862 mRNA_2494 0.68 0.7
282,913 - 10862 mRNA_2494 0.76 0.9
282,935 - 10862 mRNA_2494 0.78 0.2
283,058 + 10862 mRNA_2494 0.87 -0.5
283,199 - -0.8
283,362 - 0.6
283,467 + -0.7
283,496 - 0.8
283,500 - 0.1
283,647 + 0.2