Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2482

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252498 to 254224 10850 mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254371 to 257459 10851

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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251,608 - 0.2
251,918 + 1.2
251,944 - 1.8
252,056 + -1.3
252,057 + -0.4
252,092 - 2.8
252,161 - 0.4
252,187 + 0.2
252,196 - -1.2
252,232 + 2.4
252,258 - 0.2
252,265 - -0.3
252,372 + 0.4
252,372 - 0.6
252,373 - 0.4
252,387 + -0.5
252,826 - 10850 mRNA_2482 0.19 -1.2
253,230 - 10850 mRNA_2482 0.42 1.8
253,402 - 10850 mRNA_2482 0.52 0.9
253,412 + 10850 mRNA_2482 0.53 0.0
253,430 + 10850 mRNA_2482 0.54 0.0
253,557 - 10850 mRNA_2482 0.61 2.4
253,684 + 10850 mRNA_2482 0.69 0.8
253,859 - 10850 mRNA_2482 0.79 -1.5
253,981 - 10850 mRNA_2482 0.86 0.6
253,986 + 10850 mRNA_2482 0.86 0.3
253,986 + 10850 mRNA_2482 0.86 1.5
253,994 - 10850 mRNA_2482 0.87 -0.7
254,036 + 10850 mRNA_2482 0.89 0.1
254,147 - -0.2
254,149 - 0.4
254,303 + 2.2
254,307 + 1.0
254,318 - 0.8
254,458 - -0.0
254,715 - 10851 mRNA_2483 0.11 -0.5
254,721 - 10851 mRNA_2483 0.11 0.3
254,742 - 10851 mRNA_2483 0.12 0.7
254,751 + 10851 mRNA_2483 0.12 0.1
254,871 + 10851 mRNA_2483 0.16 -0.1
255,057 - 10851 mRNA_2483 0.22 -0.0
255,058 + 10851 mRNA_2483 0.22 -0.1