Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2478

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2477: 10845 - K00560 thyA, TYMS thymidylate synthase, at 242038 to 243139 10845 mRNA_2478: 10846 - K20293 COG6, COD2 conserved oligomeric Golgi complex subunit 6, at 243520 to 246165 10846 mRNA_2479: 10847 - Hypothetical Protein, at 246856 to 249133 10847

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
243,285 + 0.2
243,304 - 0.8
243,308 + -0.5
243,398 - 0.1
243,434 - 0.1
243,438 + 1.6
243,458 + 0.2
243,458 + 1.0
243,466 + -0.1
243,600 - -0.3
243,746 + 1.2
244,266 - 10846 mRNA_2478 0.28 -1.1
244,345 - 10846 mRNA_2478 0.31 3.3
244,498 - 10846 mRNA_2478 0.37 1.3
245,062 + 10846 mRNA_2478 0.58 0.2
245,087 + 10846 mRNA_2478 0.59 -0.2
245,165 - 10846 mRNA_2478 0.62 0.9
245,357 - 10846 mRNA_2478 0.69 -0.2
245,507 - 10846 mRNA_2478 0.75 -0.2
245,816 - 10846 mRNA_2478 0.87 -0.3
245,930 + 1.0
245,932 - 2.2
245,940 + 0.5
245,944 - -1.3
246,209 + 0.0
246,238 - 1.4
246,247 - 0.2
246,251 + 2.2
246,253 - -0.5
246,253 + 0.5
246,383 + 3.0
246,391 - 1.4
246,394 + -0.2
246,525 - 3.1
246,533 - -0.0
246,537 - -0.5
246,856 - 0.7
246,862 - 1.0
247,101 - 10847 mRNA_2479 0.11 -0.4