Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2471

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2471: 10839 - K13104 ZNF830, CCDC16 zinc finger protein 830, at 227199 to 228171 10839 mRNA_2472: 10840 - K07836 RAP1B Ras-related protein Rap-1B, at 228685 to 229666 10840

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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226,723 - -1.3
226,726 + 1.7
226,734 + 1.5
226,737 - -0.0
226,738 - -1.1
226,739 + 2.2
226,749 + -0.0
226,774 - -0.0
226,896 + -0.2
226,916 + 0.1
227,052 + -1.3
227,497 - 10839 mRNA_2471 0.31 -0.3
227,655 - 10839 mRNA_2471 0.47 -0.4
228,073 + 10839 mRNA_2471 0.90 -2.2
228,073 - 10839 mRNA_2471 0.90 0.5
228,088 - -0.9
228,170 - 0.1
228,217 - 0.9
228,218 + -0.2
228,335 - -0.0
228,346 - 1.1
228,348 - 1.4
228,360 + 0.0
228,367 + -2.0
228,372 + -0.6
228,464 - 0.0
228,466 + 0.5
228,523 - 0.2
228,644 - 0.6
228,757 - 0.4