Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2448

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2447: 10815 - Hypothetical Protein, at 155632 to 156162 10815 mRNA_2448: 10816 - Hypothetical Protein, at 157035 to 159573 10816 mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159950 to 161445 10817

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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156,037 - 10815 mRNA_2447 0.76 0.1
156,041 - 10815 mRNA_2447 0.77 -0.4
156,044 + 10815 mRNA_2447 0.78 -0.5
156,047 + 10815 mRNA_2447 0.78 -0.5
156,049 + 10815 mRNA_2447 0.79 -0.6
156,065 + 10815 mRNA_2447 0.82 2.6
156,069 + 10815 mRNA_2447 0.82 0.3
156,079 - 10815 mRNA_2447 0.84 2.1
156,079 - 10815 mRNA_2447 0.84 3.0
156,079 - 10815 mRNA_2447 0.84 1.0
156,086 - 10815 mRNA_2447 0.85 1.3
156,106 + 10815 mRNA_2447 0.89 0.4
156,110 + 0.0
156,129 - -0.1
156,141 + 0.0
156,150 + 0.2
156,170 - 1.0
156,171 - 0.3
156,182 + -0.8
156,290 - -0.5
156,291 - 0.2
156,297 + 0.4
156,331 + -0.2
156,335 + 0.3
156,337 + -0.1
156,338 + -0.2
156,350 - 0.8
156,353 + -0.1
156,397 - -0.6
156,401 + 0.9
156,402 + -0.3
156,407 + 0.8
156,415 + 0.6
156,417 + -0.1
156,431 + 0.2
156,435 + -0.4
156,450 + -0.2
156,467 + 0.1
156,493 - 0.2
156,503 - 0.2
156,507 + -0.4
156,523 - -0.4
156,525 + 0.4
156,529 - -1.1
156,534 - -0.3
156,535 + -0.9
156,543 + 0.0
156,545 - 0.4
156,549 + -0.9
156,560 - -1.8
156,568 + -0.5
156,571 - 0.4
156,593 - 0.0
156,597 - -0.6
156,599 - 1.8
156,600 - 0.3
156,609 - 1.1
156,612 + -0.6
156,614 + 2.7
156,620 + -0.2
156,622 + 0.0
156,623 + 1.3
156,631 + -0.0
156,705 - 2.2
156,715 - 0.6
156,720 - 0.3
156,723 - -0.3
156,732 + 1.1
156,733 + 1.3
156,742 - -0.4
156,746 - 2.3
156,756 - 1.2
156,801 + -1.1
156,883 + 0.3
156,919 + 0.3
156,938 + 0.4
157,027 + 1.1
157,047 + 0.6
157,053 - -0.6
157,177 + -0.4
157,476 - 10816 mRNA_2448 0.17 1.5
157,634 - 10816 mRNA_2448 0.24 1.0
157,640 - 10816 mRNA_2448 0.24 0.6
157,647 + 10816 mRNA_2448 0.24 0.1
157,788 - 10816 mRNA_2448 0.30 1.2
157,793 - 10816 mRNA_2448 0.30 -1.2
157,795 + 10816 mRNA_2448 0.30 0.5
158,082 + 10816 mRNA_2448 0.41 0.6
158,656 - 10816 mRNA_2448 0.64 0.2
158,977 - 10816 mRNA_2448 0.76 -1.6
159,086 + 10816 mRNA_2448 0.81 -0.9
159,394 - 0.4
159,424 + -2.5
159,433 - 0.5
159,522 - 0.1
159,543 - -1.1
159,643 - 0.4
159,831 + 0.6
159,851 + -0.6
159,980 - 0.0
160,001 - 2.4
160,009 - 1.3
160,272 - 10817 mRNA_2449 0.22 -0.4
160,425 - 10817 mRNA_2449 0.32 0.5