Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2441

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2440: 10808 - Hypothetical Protein, at 134243 to 137592 10808 mRNA_2441: 10809 - KOG1284 Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase, at 138011 to 140441 10809 mRNA_2442: 10810 - HMMPfam-ACT domain-PF13840,SUPERFAMILY--SSF55021, at 140857 to 142808 10810

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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137,697 - -0.0
138,025 + -0.8
138,322 + 10809 mRNA_2441 0.13 -0.3
138,626 - 10809 mRNA_2441 0.25 1.6
138,913 + 10809 mRNA_2441 0.37 -0.3
139,064 + 10809 mRNA_2441 0.43 -0.3
140,039 - 10809 mRNA_2441 0.83 1.3
140,190 - 10809 mRNA_2441 0.90 0.1
140,214 + 0.1
140,317 - -0.2
140,389 + 0.3
140,551 - 0.1
140,556 + -0.5
140,584 - -0.4
140,625 - 1.1
140,659 - 1.0
140,659 + 0.2
140,663 + 0.0
140,664 + 0.5
140,670 - 1.0
140,679 - -2.0
140,697 + -0.7
140,729 - -0.5
140,729 - -0.6
140,729 - -0.2
140,730 - -2.4
140,735 - -1.1
140,752 + -0.5
140,752 - -1.0
140,781 - 0.7
140,787 + 0.1
140,827 - -0.2
140,955 - 0.0
141,013 + -0.3