Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2415

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67466 to 70057 10782 mRNA_2415: 10783 - Hypothetical Protein, at 70099 to 71162 10783 mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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69,123 - 10782 mRNA_2414 0.64 -0.0
69,146 - 10782 mRNA_2414 0.65 0.1
69,689 - 10782 mRNA_2414 0.86 -0.5
69,712 + 10782 mRNA_2414 0.87 0.1
69,732 - 10782 mRNA_2414 0.87 0.5
69,744 - 10782 mRNA_2414 0.88 0.3
69,875 + 0.1
70,079 + 0.4
70,084 + -0.7
70,192 + 0.5
70,192 - 0.3
70,308 + 10783 mRNA_2415 0.20 0.6
70,478 + 10783 mRNA_2415 0.36 -0.4
70,480 - 10783 mRNA_2415 0.36 -0.5
70,499 - 10783 mRNA_2415 0.38 1.3
70,606 + 10783 mRNA_2415 0.48 -0.6
70,613 - 10783 mRNA_2415 0.48 -0.3
70,638 + 10783 mRNA_2415 0.51 -1.1
70,675 - 10783 mRNA_2415 0.54 -1.5
70,901 + 10783 mRNA_2415 0.75 0.4
70,909 + 10783 mRNA_2415 0.76 -0.1
70,967 + 10783 mRNA_2415 0.82 -0.1
71,069 + -0.8
71,100 - -0.0
71,184 + 0.8
71,203 - 2.5
71,210 - 0.8
71,351 - -0.6
71,364 - 0.4
71,371 - 2.6
71,405 + -0.5
71,515 - -0.5
71,528 + 0.5
71,538 + 0.7
71,541 + 0.5
71,542 + 0.6
71,663 - 0.5
71,667 + 1.6
71,806 - 0.4
71,812 - -0.8
71,827 - -0.0
71,840 - 0.4
71,840 - -0.0
71,841 + -1.4
71,860 - 0.6
72,027 + 0.5
72,108 + 0.4
72,143 - -0.2
72,158 - -0.8