Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2304

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2303: 10671 - Hypothetical Protein, at 565712 to 566657 10671 mRNA_2304: 10672 - Hypothetical Protein, at 567046 to 568484 10672 mRNA_2305: 10673 - K01082 cysQ, MET22, BPNT1 3'(2'), 5'-bisphosphate nucleotidase, at 568703 to 570355 10673

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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566,216 + 10671 mRNA_2303 0.53 0.9
566,359 + 10671 mRNA_2303 0.68 0.2
566,486 - 10671 mRNA_2303 0.82 0.9
566,630 + -0.3
566,763 - 1.0
566,765 - -0.2
566,765 - -1.3
566,891 - 0.2
567,210 - 10672 mRNA_2304 0.11 1.6
567,228 - 10672 mRNA_2304 0.13 -0.3
567,358 - 10672 mRNA_2304 0.22 0.3
567,513 + 10672 mRNA_2304 0.32 0.4
567,526 + 10672 mRNA_2304 0.33 1.4
567,962 - 10672 mRNA_2304 0.64 0.0
568,234 + 10672 mRNA_2304 0.83 1.1
568,266 - 10672 mRNA_2304 0.85 -0.6
568,269 + 10672 mRNA_2304 0.85 -0.5
568,381 + 0.3
568,390 + 1.3
568,391 - 1.8
568,398 - -1.4
568,399 + 2.1
568,405 - -0.3
568,406 + -0.2
568,415 + 0.2
568,418 + -0.5
568,441 + 0.2
568,561 + 0.3
568,582 - 0.0
568,586 - -0.3
568,586 - -0.7
568,599 + 1.1
568,606 - 1.0
568,615 + -0.4
568,619 - -0.2
568,712 - 0.9