Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2293

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2292: 10660 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 543301 to 545980 10660 mRNA_2293: 10661 - BLAST splicing arginine serine-rich 12 [Moesziomyces an..., at 546142 to 547358 10661 mRNA_2294: 10662 - KOG4131 Ngg1-interacting factor 3 protein NIF3L1, at 547521 to 548816 10662

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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546,205 + 0.0
546,286 + 10661 mRNA_2293 0.12 0.9
546,565 + 10661 mRNA_2293 0.35 -0.6
546,599 - 10661 mRNA_2293 0.38 1.0
546,853 + 10661 mRNA_2293 0.58 0.3
547,303 + -0.5
547,304 - 0.1
547,307 + 1.2
547,309 + -0.3
547,325 + 1.1
547,453 - -0.1
547,599 + -0.8
547,602 + -0.9
547,874 + 10662 mRNA_2294 0.27 1.9
547,891 - 10662 mRNA_2294 0.29 -0.8
547,898 + 10662 mRNA_2294 0.29 2.6
547,913 - 10662 mRNA_2294 0.30 0.7
548,063 + 10662 mRNA_2294 0.42 -0.2
548,318 - 10662 mRNA_2294 0.61 -0.1