Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2267

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2265: 10633 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 486068 to 487753 10633 mRNA_2266: 10634 - Hypothetical Protein, at 487843 to 488421 10634 mRNA_2267: 10635 - K15110 SLC25A21, ODC solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21, at 488523 to 490039 10635 mRNA_2268: 10636 - K11215 STE12 transcription factor STE12, at 490121 to 491043 10636

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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488,426 - 0.5
488,426 - -0.4
488,429 - 0.1
488,433 - -0.1
488,435 - 1.2
488,448 - -0.8
488,453 + 0.2
488,460 - 2.0
488,461 - -0.2
488,463 + 1.1
488,465 + 2.2
488,474 - -0.2
488,483 + -0.7
488,608 + 0.2
488,612 - 0.5
488,624 + -0.6
488,761 + 10635 mRNA_2267 0.16 -0.7
488,762 + 10635 mRNA_2267 0.16 1.9
488,762 + 10635 mRNA_2267 0.16 0.9
488,775 + 10635 mRNA_2267 0.17 -1.3
488,904 - 10635 mRNA_2267 0.25 -0.1
488,940 - 10635 mRNA_2267 0.27 -0.1
489,078 + 10635 mRNA_2267 0.37 1.0
489,495 - 10635 mRNA_2267 0.64 -1.7
489,666 + 10635 mRNA_2267 0.75 -0.8
489,879 - 10635 mRNA_2267 0.89 0.8
490,072 + 0.6
490,197 + -0.5
490,208 - 1.2
490,361 - 10636 mRNA_2268 0.26 1.5
490,362 + 10636 mRNA_2268 0.26 -0.6
490,517 - 10636 mRNA_2268 0.43 -0.6
490,649 - 10636 mRNA_2268 0.57 -0.2
490,658 + 10636 mRNA_2268 0.58 2.2
490,790 - 10636 mRNA_2268 0.72 0.1
490,798 - 10636 mRNA_2268 0.73 -0.0
490,850 - 10636 mRNA_2268 0.79 0.3
490,932 + 10636 mRNA_2268 0.88 2.3
490,944 - 10636 mRNA_2268 0.89 -0.5
490,952 - 0.2
490,965 + 1.4