Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2248

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2247: 10615 - Hypothetical Protein, at 459109 to 460029 10615 mRNA_2248: 10616 - K01338 lon ATP-dependent Lon protease, at 460381 to 463216 10616 mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463565 to 464577 10617

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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459,384 - 10615 mRNA_2247 0.30 0.1
459,392 - 10615 mRNA_2247 0.31 -0.4
459,401 - 10615 mRNA_2247 0.32 -0.2
459,573 + 10615 mRNA_2247 0.50 1.4
459,708 - 10615 mRNA_2247 0.65 0.6
459,723 + 10615 mRNA_2247 0.67 -1.0
459,772 - 10615 mRNA_2247 0.72 0.8
460,165 + -1.1
460,424 - 0.4
460,578 + -0.0
460,876 + 10616 mRNA_2248 0.17 -1.2
461,060 + 10616 mRNA_2248 0.24 -1.0
461,320 + 10616 mRNA_2248 0.33 1.3
462,068 - 10616 mRNA_2248 0.59 1.4
462,488 + 10616 mRNA_2248 0.74 -0.1
462,934 + 0.2
463,151 + -0.4
463,343 + -0.3
463,349 + -0.1
463,619 - 0.9