Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2243

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2242: 10610 - Hypothetical Protein, at 448063 to 449685 10610 mRNA_2243: 10611 - SUPERFAMILY--SSF52266, at 450168 to 452098 10611 mRNA_2244: 10612 - KOG4120 G/T mismatch-specific thymine DNA glycosylase, at 452902 to 454246 10612

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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449,241 + 10610 mRNA_2242 0.73 -0.5
449,423 - 10610 mRNA_2242 0.84 0.2
449,680 + 1.3
449,698 + -0.2
449,833 + -0.6
449,996 + -1.2
450,014 - -0.4
450,306 + 0.5
450,420 + 10611 mRNA_2243 0.13 -0.9
450,572 + 10611 mRNA_2243 0.21 0.2
450,729 - 10611 mRNA_2243 0.29 -0.6
450,858 + 10611 mRNA_2243 0.36 -0.1
450,871 - 10611 mRNA_2243 0.36 -0.8
450,980 + 10611 mRNA_2243 0.42 0.1
451,016 + 10611 mRNA_2243 0.44 -1.4
451,610 - 10611 mRNA_2243 0.75 1.9
451,901 - 10611 mRNA_2243 0.90 0.1
452,007 - 0.6
452,021 - 2.6
452,036 + 1.3
452,182 - -0.5
452,193 + 0.1
452,201 + 0.1
452,214 + -0.7
452,217 + 0.7
452,220 + 0.2
452,222 + 0.5
452,226 - 0.8
452,231 + 0.6
452,241 + 0.5
452,245 + 0.4
452,264 - 1.2
452,283 - 1.9
452,286 + 2.4
452,288 + -1.2
452,294 - -0.0
452,295 + 0.8
452,298 - 0.8
452,313 - 0.1
452,339 + 1.4
452,350 - 0.6
452,359 + 1.4
452,362 + -0.1
452,372 - 0.3
452,385 - 1.4
452,388 - 0.3
452,400 + 2.8
452,409 + -0.2
452,410 - 0.9
452,415 - 0.2
452,432 - 1.1
452,441 - 0.3
452,443 + 0.6
452,445 + 0.1
452,453 - -2.7
452,458 - -0.2
452,458 - -0.5
452,460 - 0.4
452,461 - 0.4
452,475 + 1.7
452,480 + -1.0
452,480 + 1.3
452,488 - 0.6
452,490 - 0.5
452,490 - -0.1
452,495 + -2.3
452,499 + 0.2
452,499 + -0.2
452,500 + 2.1
452,503 - -0.6
452,506 - 0.1
452,506 - 0.0
452,522 - -0.1
452,522 - 0.4
452,522 - 0.8
452,540 - 1.5
452,559 + 0.4
452,578 + 0.9
452,605 + 1.8
452,623 - 1.2
452,631 + -0.1
452,631 - 0.8
452,635 + -0.6
452,649 + 0.7
452,666 - 1.4
452,773 - -0.7
452,782 + 1.5
452,798 + -1.7
452,811 + -0.3
452,917 - 1.1
452,928 + -0.7