Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2172

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244214 to 249218 10539 mRNA_2172: 10540 - K00968 PCYT1 choline-phosphate cytidylyltransferase, at 249604 to 252159 10540 mRNA_2173: 10541 - K03950 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6, at 252684 to 253574 10541

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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248,650 + 10539 mRNA_2171 0.89 -0.2
248,656 + 10539 mRNA_2171 0.89 0.2
248,956 - -0.1
248,969 - 0.5
249,116 - 0.4
249,242 - 0.7
249,271 + 1.2
249,515 + 1.1
249,647 - -0.2
250,700 + 10540 mRNA_2172 0.43 0.5
250,705 - 10540 mRNA_2172 0.43 0.9
250,785 - 10540 mRNA_2172 0.46 -0.3
250,827 + 10540 mRNA_2172 0.48 2.0
250,838 + 10540 mRNA_2172 0.48 -1.4
250,998 + 10540 mRNA_2172 0.55 1.3
251,308 + 10540 mRNA_2172 0.67 0.0
252,595 + -0.2
252,896 - 10541 mRNA_2173 0.24 -1.5
252,922 - 10541 mRNA_2173 0.27 0.5