Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2169

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2168: 10536 - Hypothetical Protein, at 237845 to 238808 10536 mRNA_2169: 10537 - Hypothetical Protein, at 239219 to 240668 10537 mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240753 to 243794 10538

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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238,355 - 10536 mRNA_2168 0.53 -1.1
238,401 + 10536 mRNA_2168 0.58 0.6
238,421 - 10536 mRNA_2168 0.60 0.3
238,525 - 10536 mRNA_2168 0.71 -0.3
238,656 + 10536 mRNA_2168 0.84 1.0
238,665 + 10536 mRNA_2168 0.85 -0.4
238,670 - 10536 mRNA_2168 0.86 0.4
238,705 - 10536 mRNA_2168 0.89 0.2
238,947 - 0.4
238,958 + -1.1
239,120 + -0.6
239,125 - -0.6
239,360 - -1.2
239,387 - 10537 mRNA_2169 0.12 -0.2
239,419 + 10537 mRNA_2169 0.14 1.2
239,550 + 10537 mRNA_2169 0.23 -0.4
239,734 + 10537 mRNA_2169 0.36 0.4
239,844 + 10537 mRNA_2169 0.43 -1.6
239,905 - 10537 mRNA_2169 0.47 0.0
240,128 + 10537 mRNA_2169 0.63 1.7
240,181 - 10537 mRNA_2169 0.66 -0.5
240,277 - 10537 mRNA_2169 0.73 0.1
240,336 - 10537 mRNA_2169 0.77 -0.3
240,438 - 10537 mRNA_2169 0.84 1.0
240,602 + -0.1
240,823 - 0.6
240,909 + -0.1
240,914 + 0.6
241,049 + -0.4
241,314 + 10538 mRNA_2170 0.18 -0.9
241,632 - 10538 mRNA_2170 0.29 0.3
241,657 + 10538 mRNA_2170 0.30 -1.8