Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2131

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2131: 10499 - K09580 PDIA1, P4HB protein disulfide-isomerase A1, at 141323 to 143619 10499 mRNA_2132: 10500 - Hypothetical Protein, at 144026 to 145888 10500

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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140,337 + 0.6
140,419 - -0.3
140,537 + -0.2
140,678 + -0.6
140,734 + 0.7
140,734 + -0.7
140,768 - 1.3
140,883 + 0.9
140,885 - 1.1
140,888 + -0.4
140,899 - -0.0
141,202 + -0.2
141,232 + 0.2
141,315 - -1.3
141,912 - 10499 mRNA_2131 0.26 1.5
142,197 - 10499 mRNA_2131 0.38 1.4
142,765 + 10499 mRNA_2131 0.63 0.1
142,773 - 10499 mRNA_2131 0.63 -1.9
143,345 - 10499 mRNA_2131 0.88 1.6
143,404 - 0.0
143,629 + 0.7
143,660 - 0.1
143,682 + 0.3
143,690 + 0.2
143,754 - 0.5
143,816 - 0.1
143,824 - 0.2
143,825 + 0.1
143,835 - 0.6
143,843 + 0.5
143,844 + 1.9
143,916 - 0.6
143,961 - 0.4
143,966 + 1.0
144,074 - 0.5
144,099 - 3.1
144,099 + 1.4
144,105 - 0.2
144,112 - -1.7
144,571 - 10500 mRNA_2132 0.29 -0.5