Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2127

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2126: 10494 - Hypothetical Protein, at 130943 to 133180 10494 mRNA_2127: 10495 - BLAST putative lipase ATG15 [Grifola frondosa], at 133530 to 135409 10495 mRNA_2128: 10496 - Hypothetical Protein, at 135879 to 136766 10496

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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132,535 - 10494 mRNA_2126 0.71 0.6
132,853 + 10494 mRNA_2126 0.85 -0.5
133,104 + -1.5
133,114 - 2.4
133,286 + 2.0
133,451 - -1.2
133,453 + -0.1
133,735 + 10495 mRNA_2127 0.11 -1.6
133,743 + 10495 mRNA_2127 0.11 0.1
133,847 + 10495 mRNA_2127 0.17 -0.7
133,883 - 10495 mRNA_2127 0.19 -1.1
134,255 - 10495 mRNA_2127 0.39 0.4
134,270 + 10495 mRNA_2127 0.39 0.7
134,289 - 10495 mRNA_2127 0.40 -1.3
134,327 - 10495 mRNA_2127 0.42 0.5
134,487 + 10495 mRNA_2127 0.51 1.1
134,629 - 10495 mRNA_2127 0.58 1.8
134,735 - 10495 mRNA_2127 0.64 0.6
134,867 + 10495 mRNA_2127 0.71 0.1
134,912 + 10495 mRNA_2127 0.74 1.7
135,150 - 10495 mRNA_2127 0.86 0.3
135,156 - 10495 mRNA_2127 0.86 -0.4
135,755 - -0.1
135,934 - -0.2