Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2103

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2102: 10470 - SUPERFAMILY--SSF53067, at 76785 to 80345 10470 mRNA_2103: 10471 - Hypothetical Protein, at 80514 to 81311 10471 mRNA_2104: 10472 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 81364 to 84462 10472

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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79,665 + 10470 mRNA_2102 0.81 -0.2
80,131 + 0.2
80,372 + 0.3
80,794 - 10471 mRNA_2103 0.35 -0.8
80,825 - 10471 mRNA_2103 0.39 0.3
80,825 - 10471 mRNA_2103 0.39 -0.1
80,825 - 10471 mRNA_2103 0.39 -1.3
80,960 + 10471 mRNA_2103 0.56 -1.0
80,969 + 10471 mRNA_2103 0.57 0.8
81,096 + 10471 mRNA_2103 0.73 -0.1
81,102 - 10471 mRNA_2103 0.74 0.3
81,107 + 10471 mRNA_2103 0.74 -0.0
81,108 - 10471 mRNA_2103 0.74 0.8
81,111 - 10471 mRNA_2103 0.75 -0.5
81,128 + 10471 mRNA_2103 0.77 -1.2
81,138 + 10471 mRNA_2103 0.78 0.5
81,190 + 10471 mRNA_2103 0.85 -0.1
81,450 + -0.2
81,536 + 0.6
81,772 + 10472 mRNA_2104 0.13 0.3
81,831 - 10472 mRNA_2104 0.15 -0.9
81,838 + 10472 mRNA_2104 0.15 0.6
81,857 - 10472 mRNA_2104 0.16 -0.5
81,909 - 10472 mRNA_2104 0.18 0.3
81,991 - 10472 mRNA_2104 0.20 0.5
82,022 + 10472 mRNA_2104 0.21 0.3
82,238 + 10472 mRNA_2104 0.28 -0.3
82,255 - 10472 mRNA_2104 0.29 1.2