Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2095

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2094: 10462 - Hypothetical Protein, at 56857 to 57476 10462 mRNA_2095: 10463 - Hypothetical Protein, at 57763 to 59527 10463 mRNA_2096: 10464 - K05754 ARPC5 actin related protein 2/3 complex, subunit 5, at 59907 to 60818 10464

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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56,764 - 0.7
56,766 - 0.7
56,776 + 0.4
56,776 - -0.5
56,786 - 0.5
56,803 + 0.2
56,926 + 10462 mRNA_2094 0.11 1.6
56,933 - 10462 mRNA_2094 0.12 0.3
57,058 - 10462 mRNA_2094 0.32 0.3
57,062 - 10462 mRNA_2094 0.33 0.2
57,200 - 10462 mRNA_2094 0.55 0.0
57,614 + -0.7
57,627 - 0.3
57,961 - 10463 mRNA_2095 0.11 -0.5
58,281 + 10463 mRNA_2095 0.29 1.0
58,396 - 10463 mRNA_2095 0.36 -0.8
58,667 - 10463 mRNA_2095 0.51 0.4
58,829 - 10463 mRNA_2095 0.60 1.3
58,846 + 10463 mRNA_2095 0.61 2.2
58,859 - 10463 mRNA_2095 0.62 0.1
58,967 + 10463 mRNA_2095 0.68 0.8
58,972 - 10463 mRNA_2095 0.68 1.1
58,985 - 10463 mRNA_2095 0.69 0.1
59,133 - 10463 mRNA_2095 0.78 -1.7
59,241 - 10463 mRNA_2095 0.84 -0.5
59,369 + 0.1
59,548 - -1.2
59,552 + 1.8
59,557 - -0.5
59,693 + 0.7
59,694 - 1.5
59,698 - -0.0
59,792 - 1.1
59,823 + -0.0
59,877 + -0.5
59,899 - -0.2