Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2082

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2081: 10449 - BLAST 163.m06341p [Cryptococcus neoformans], at 25578 to 27560 10449 mRNA_2082: 10450 - Hypothetical Protein, at 27894 to 29242 10450

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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27,021 + 10449 mRNA_2081 0.73 -1.2
27,045 + 10449 mRNA_2081 0.74 0.6
27,196 - 10449 mRNA_2081 0.82 0.0
27,445 - 0.4
27,469 - 0.6
27,480 + -0.2
27,512 + -0.7
27,564 + -1.2
27,623 - 0.8
27,624 - 0.9
27,741 + 2.3
27,745 - 1.7
27,752 - 2.3
27,791 + -0.5
27,813 - -1.6
27,818 + 1.1
27,828 + 3.0
27,910 - 1.5
27,987 - 1.6
28,096 + 10450 mRNA_2082 0.15 -1.1
28,099 - 10450 mRNA_2082 0.15 0.8
28,258 + 10450 mRNA_2082 0.27 0.9
28,415 - 10450 mRNA_2082 0.39 1.7
28,553 - 10450 mRNA_2082 0.49 0.4
28,789 - 10450 mRNA_2082 0.66 2.5
28,953 - 10450 mRNA_2082 0.79 2.4
29,113 - -0.1
29,256 + 0.4
29,512 + -0.3
29,516 - 0.3
29,525 - -0.6
29,526 + 0.4
29,530 + -0.5
29,532 - 0.3
29,535 - -1.5
29,551 - 0.4
29,700 - -0.4
29,708 + 1.1
29,710 + -0.3
29,711 + 0.3
29,738 + 1.2
29,818 - 0.4
29,851 + -0.1
29,867 + 1.4
29,886 - -1.0