Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2037

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2036: 10404 - HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199, at 804134 to 805617 10404 mRNA_2037: 10405 - Hypothetical Protein, at 806389 to 807325 10405 mRNA_2038: 10406 - Hypothetical Protein, at 807338 to 808315 10406

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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805,799 + 0.9
806,109 - 1.1
806,122 - 2.3
806,129 + -1.0
806,251 - 0.5
806,259 - 0.0
806,358 - -0.7
806,366 + 0.4
806,403 + -0.5
806,482 + -0.1
806,531 + 10405 mRNA_2037 0.15 -0.2
806,595 - 10405 mRNA_2037 0.22 0.6
806,596 - 10405 mRNA_2037 0.22 1.2
806,600 + 10405 mRNA_2037 0.23 -1.1
806,613 + 10405 mRNA_2037 0.24 1.6
806,630 - 10405 mRNA_2037 0.26 0.2
806,653 + 10405 mRNA_2037 0.28 -1.1
806,708 + 10405 mRNA_2037 0.34 -0.5
806,738 + 10405 mRNA_2037 0.37 -0.1
806,749 - 10405 mRNA_2037 0.38 -0.4
806,755 + 10405 mRNA_2037 0.39 0.1
806,833 - 10405 mRNA_2037 0.47 0.1
807,003 + 10405 mRNA_2037 0.66 1.1
807,047 - 10405 mRNA_2037 0.70 0.6
807,096 + 10405 mRNA_2037 0.75 -0.6
807,115 + 10405 mRNA_2037 0.77 1.8
807,119 - 10405 mRNA_2037 0.78 -1.0
807,559 - 10406 mRNA_2038 0.23 0.4
807,687 + 10406 mRNA_2038 0.36 -0.2
808,295 + 1.0