Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1955

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1954: 10322 - Hypothetical Protein, at 601425 to 602462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603461 to 605817 10323

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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602,471 - 1.3
602,512 + 0.2
603,050 + 0.3
603,052 - 0.2
603,345 - 2.8
603,362 - 0.1
603,385 + -1.4
603,496 - -0.1
604,343 + 10323 mRNA_1955 0.37 0.1
604,645 + 10323 mRNA_1955 0.50 -0.3
604,656 + 10323 mRNA_1955 0.51 -0.8
604,680 + 10323 mRNA_1955 0.52 1.2
604,770 + 10323 mRNA_1955 0.56 1.8
604,785 + 10323 mRNA_1955 0.56 1.1
605,004 - 10323 mRNA_1955 0.65 0.2
605,235 - 10323 mRNA_1955 0.75 -0.3
605,941 - -0.2
606,122 + -0.6
606,243 - -1.0
606,372 + 2.2
606,388 - -0.4
606,407 + 1.2
606,410 + 1.7
606,541 + 1.0
606,542 + 0.3
606,542 - 0.1
606,551 - -0.7
606,594 + -0.1
606,680 - -0.1
606,704 - -0.2
606,710 + 2.8