Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1928
Experiments: 40 hrs Median Buoyancy
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).
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Per-strain Table
Position | Strand | Gene | Sysname | Fraction | 40 hrs Median Buoyancy |
---|---|---|---|---|---|
remove | |||||
533,297 | + | 0.5 | |||
533,299 | - | 0.3 | |||
533,316 | - | 3.0 | |||
533,346 | - | 0.6 | |||
533,439 | - | 0.3 | |||
533,449 | - | -0.1 | |||
533,452 | - | 0.4 | |||
533,460 | - | 0.7 | |||
533,465 | + | 1.8 | |||
533,467 | - | 0.4 | |||
533,471 | - | 0.2 | |||
533,476 | - | 0.3 | |||
533,479 | - | 1.4 | |||
533,577 | + | 0.0 | |||
533,582 | - | -0.1 | |||
533,586 | - | 0.7 | |||
533,590 | + | 1.5 | |||
533,591 | + | -0.0 | |||
533,600 | - | 0.6 | |||
533,615 | - | 0.8 | |||
533,617 | - | 0.4 | |||
533,619 | + | -0.3 | |||
533,621 | + | -0.1 | |||
533,621 | + | -0.5 | |||
533,624 | + | 1.2 | |||
533,628 | + | 1.4 | |||
533,650 | - | 2.4 | |||
533,665 | - | -0.6 | |||
533,671 | - | 0.3 | |||
533,675 | + | -0.3 | |||
533,677 | + | -0.1 | |||
533,677 | - | 0.1 | |||
533,677 | - | 0.2 | |||
533,678 | - | -0.0 | |||
533,680 | + | -0.3 | |||
533,682 | - | 1.1 | |||
533,687 | + | -0.5 | |||
533,696 | - | -0.1 | |||
533,699 | - | -0.1 | |||
533,700 | + | 0.3 | |||
533,701 | + | -0.8 | |||
533,704 | + | -0.3 | |||
533,705 | - | -0.1 | |||
533,717 | - | -0.5 | |||
533,721 | - | -1.5 | |||
533,721 | + | -0.9 | |||
533,722 | + | -0.1 | |||
533,722 | + | -0.4 | |||
533,765 | + | 0.7 | |||
533,783 | + | 1.8 | |||
533,792 | + | 1.1 | |||
533,793 | - | 2.7 | |||
533,814 | + | -1.5 | |||
533,816 | - | -0.6 | |||
533,822 | + | 0.7 | |||
533,828 | - | -0.2 | |||
533,843 | + | 1.4 | |||
533,844 | - | -0.9 | |||
533,855 | + | 1.5 | |||
533,863 | + | 0.0 | |||
533,864 | - | -0.1 | |||
533,868 | + | 0.2 | |||
533,879 | + | 0.0 | |||
533,880 | - | -0.2 | |||
533,892 | + | 0.2 | |||
533,897 | + | 0.7 | |||
533,897 | + | 0.2 | |||
533,899 | + | 0.0 | |||
533,903 | + | 2.0 | |||
533,904 | + | -0.5 | |||
533,905 | + | 0.1 | |||
533,927 | - | 2.2 | |||
533,931 | + | 1.9 | |||
533,936 | + | 0.1 | |||
533,938 | + | 0.9 | |||
533,941 | + | 0.9 | |||
533,957 | + | 0.1 | |||
534,017 | - | 0.2 | |||
534,017 | - | 0.2 | |||
534,033 | + | 0.5 | |||
534,047 | + | 1.2 | |||
534,049 | - | 1.4 | |||
534,053 | - | 0.9 | |||
534,056 | + | -0.2 | |||
534,057 | + | 1.0 | |||
534,062 | - | -0.0 | |||
534,063 | + | 0.0 | |||
534,066 | + | 2.1 | |||
534,069 | + | -0.8 | |||
534,072 | + | 0.1 | |||
534,075 | - | -0.8 | |||
534,077 | - | 2.0 | |||
534,077 | - | 0.8 | |||
534,081 | + | 1.5 | |||
534,086 | - | -0.5 | |||
534,088 | - | -0.0 | |||
534,091 | + | 0.4 | |||
534,093 | - | 0.3 | |||
534,095 | - | 1.2 | |||
534,096 | + | 0.3 | |||
534,101 | + | -0.8 | |||
534,110 | + | 0.4 | |||
534,229 | + | 1.3 | |||
534,236 | - | 0.5 | |||
534,238 | - | 0.6 | |||
534,247 | - | 3.1 | |||
534,249 | + | 0.3 | |||
534,255 | + | 0.0 | |||
534,262 | + | -0.2 | |||
534,262 | + | 0.9 | |||
534,273 | + | 0.1 | |||
534,278 | + | -0.1 | |||
534,370 | - | 10296 | mRNA_1928 | 0.13 | 0.5 |
534,381 | - | 10296 | mRNA_1928 | 0.14 | 0.3 |
534,386 | - | 10296 | mRNA_1928 | 0.15 | 0.2 |
534,388 | - | 10296 | mRNA_1928 | 0.16 | -0.9 |
534,398 | + | 10296 | mRNA_1928 | 0.17 | -0.3 |
534,401 | - | 10296 | mRNA_1928 | 0.18 | -0.2 |
534,407 | - | 10296 | mRNA_1928 | 0.19 | 0.2 |
534,409 | + | 10296 | mRNA_1928 | 0.19 | 0.9 |
534,418 | + | 10296 | mRNA_1928 | 0.21 | 0.7 |
534,425 | - | 10296 | mRNA_1928 | 0.22 | -0.7 |
534,525 | - | 10296 | mRNA_1928 | 0.39 | 0.3 |
534,535 | - | 10296 | mRNA_1928 | 0.41 | 0.2 |
534,538 | - | 10296 | mRNA_1928 | 0.41 | -0.5 |
534,551 | - | 10296 | mRNA_1928 | 0.44 | -0.9 |
534,556 | + | 10296 | mRNA_1928 | 0.45 | -0.4 |
534,580 | - | 10296 | mRNA_1928 | 0.49 | 2.1 |
534,693 | + | 10296 | mRNA_1928 | 0.68 | 0.0 |
534,703 | + | 10296 | mRNA_1928 | 0.70 | 0.1 |
534,858 | + | 1.3 | |||
534,994 | + | 0.3 | |||
535,132 | - | 0.6 | |||
535,307 | - | 0.1 | |||
535,312 | + | 0.2 | |||
535,441 | - | -0.2 | |||
535,581 | - | 0.3 | |||
535,581 | + | -0.2 | |||
535,605 | + | -0.7 | |||
535,716 | - | 1.6 | |||
535,726 | - | -0.4 | |||
535,732 | - | 0.8 | |||
535,733 | + | -0.1 | |||
535,740 | + | 2.6 | |||
535,745 | - | 1.6 | |||
535,745 | - | 1.8 | |||
535,755 | + | 0.4 | |||
535,755 | + | -1.5 | |||
535,757 | - | -1.0 | |||
535,760 | - | 0.2 | |||
535,799 | - | -1.0 |