Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1923

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518847 to 519239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519459 to 521071 10291 mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521294 to 523495 10292

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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518,611 - 10289 mRNA_1921 0.79 -2.1
518,615 - 10289 mRNA_1921 0.80 2.7
518,936 - 10290 mRNA_1922 0.23 2.1
519,163 - 10290 mRNA_1922 0.80 -0.0
519,377 - 0.8
519,674 + 10291 mRNA_1923 0.13 -0.3
520,262 - 10291 mRNA_1923 0.50 1.1
520,289 + 10291 mRNA_1923 0.51 0.2
520,403 + 10291 mRNA_1923 0.59 -0.2
520,562 + 10291 mRNA_1923 0.68 1.2
520,961 - 0.5
520,987 + 0.6
521,109 - -0.3
521,119 + 1.0
521,123 - -0.5
521,274 + 0.7
521,278 + 0.6
521,286 + 2.1
521,318 + -0.7
521,432 + 1.2
521,435 - 0.1
521,482 + -0.3
521,567 - 10292 mRNA_1924 0.12 -0.0
521,726 - 10292 mRNA_1924 0.20 0.9
521,727 - 10292 mRNA_1924 0.20 -1.0
521,757 + 10292 mRNA_1924 0.21 1.5
521,995 + 10292 mRNA_1924 0.32 0.7