Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1908

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490535 to 492598 10276 mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493180 to 495383 10277

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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489,852 - 0.1
490,154 + 1.4
490,351 - -0.9
490,583 - -0.2
490,610 + 1.1
490,619 - 0.2
490,903 + 10276 mRNA_1908 0.18 0.3
491,306 - 10276 mRNA_1908 0.37 -0.5
491,468 - 10276 mRNA_1908 0.45 -0.4
491,499 - 10276 mRNA_1908 0.47 -0.6
491,956 + 10276 mRNA_1908 0.69 1.0
492,198 + 10276 mRNA_1908 0.81 0.4
492,381 + 10276 mRNA_1908 0.89 -0.8
492,681 - 0.7
492,934 + 1.5
493,073 - -0.5
493,219 + -0.5
493,266 + -0.2
493,390 + 0.2
493,540 + 10277 mRNA_1909 0.16 -0.6