Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1899

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1898: 10266 - K09422 MYBP myb proto-oncogene protein, plant, at 459751 to 462341 10266 mRNA_1899: 10267 - K14946 RBFOX, FOX RNA binding protein fox-1, at 462869 to 464416 10267 mRNA_1900: 10268 - K15071 RCY1, POF6 recyclin-1, at 464695 to 468117 10268

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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462,424 + -0.8
462,426 - -0.5
462,557 - 1.1
462,562 - -1.2
462,565 - -0.9
462,572 + 0.4
462,574 + -0.6
462,696 - 1.8
462,708 + 2.2
462,723 - -0.8
462,857 - -0.5
462,865 + 1.7
463,019 + 0.6
463,166 - 10267 mRNA_1899 0.19 -1.3
463,194 - 10267 mRNA_1899 0.21 -1.5
463,430 - 10267 mRNA_1899 0.36 -2.1
463,575 - 10267 mRNA_1899 0.46 0.9
463,748 - 10267 mRNA_1899 0.57 -0.1
463,748 - 10267 mRNA_1899 0.57 -0.0
464,132 - 10267 mRNA_1899 0.82 -0.5
464,274 - 0.0
464,583 + -1.9
464,940 - 1.2
464,984 - 0.1
465,036 + 2.8
465,347 + 10268 mRNA_1900 0.19 0.2