Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1894

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1893: 10261 - HMMPfam-Amidohydrolase-PF04909,SUPERFAMILY--SSF51556, at 448641 to 450220 10261 mRNA_1894: 10262 - K01253 EPHX1 microsomal epoxide hydrolase, at 450582 to 452258 10262 mRNA_1895: 10263 - K09247 CYP1, HAP1 heme activator protein 1, at 452374 to 455740 10263

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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449,764 - 10261 mRNA_1893 0.71 1.0
449,776 + 10261 mRNA_1893 0.72 3.0
449,916 - 10261 mRNA_1893 0.81 -0.5
450,199 - -0.9
450,314 - -2.0
450,331 + 0.2
450,348 - 0.0
450,521 + -0.1
450,665 - 1.1
450,671 + 1.2
450,672 - 0.7
450,676 + 0.1
450,695 + 0.7
451,240 + 10262 mRNA_1894 0.39 -0.0
451,387 + 10262 mRNA_1894 0.48 0.0
451,550 + 10262 mRNA_1894 0.58 0.1
451,556 - 10262 mRNA_1894 0.58 -0.3
451,662 + 10262 mRNA_1894 0.64 0.0
451,834 + 10262 mRNA_1894 0.75 1.6
452,384 + 1.0
452,396 - -0.8
452,559 + -0.5
453,103 - 10263 mRNA_1895 0.22 -0.5
453,174 + 10263 mRNA_1895 0.24 -1.1