Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1891

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1890: 10258 - Hypothetical Protein, at 442391 to 442819 10258 mRNA_1891: 10259 - K03083 GSK3B glycogen synthase kinase 3 beta, at 443414 to 444929 10259 mRNA_1892: 10260 - K15743 CES3_5 carboxylesterase 3/5, at 445526 to 447987 10260

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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442,427 - 1.4
442,431 - -0.3
442,444 - 10258 mRNA_1890 0.12 1.5
442,460 - 10258 mRNA_1890 0.16 1.8
442,466 + 10258 mRNA_1890 0.17 0.4
442,553 + 10258 mRNA_1890 0.38 1.9
442,605 - 10258 mRNA_1890 0.50 0.5
442,623 + 10258 mRNA_1890 0.54 0.5
442,763 + 10258 mRNA_1890 0.87 0.5
442,919 - -2.8
442,927 + -1.4
442,927 + -0.7
442,946 + -1.6
442,947 + -1.0
443,113 + 0.6
443,225 - -2.4
443,849 - 10259 mRNA_1891 0.29 -0.5
444,256 - 10259 mRNA_1891 0.56 -2.4
444,457 - 10259 mRNA_1891 0.69 1.7
444,573 + 10259 mRNA_1891 0.76 -2.2
444,907 - 0.3
445,177 - 1.6
445,187 + -0.1
445,399 - 0.1
445,455 + -0.6