Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1874

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1873: 10241 - BLAST Rab geranylgeranyltransferase [Mycena chlorophos], at 411554 to 414002 10241 mRNA_1874: 10242 - BLAST midasin [Pseudozyma hubeiensis SY62], at 414154 to 415207 10242 mRNA_1875: 10243 - Hypothetical Protein, at 415484 to 416261 10243

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
413,359 - 10241 mRNA_1873 0.74 -0.7
413,364 - 10241 mRNA_1873 0.74 -0.3
413,474 + 10241 mRNA_1873 0.78 -0.2
413,481 - 10241 mRNA_1873 0.79 0.1
413,785 + 2.2
413,929 - -2.1
413,948 + -0.2
414,068 - -0.3
414,103 + 0.2
414,108 - -0.3
414,117 + -1.4
414,124 + 0.5
414,241 - -0.9
414,249 - 0.1
414,253 + 1.0
414,256 + 0.7
414,414 + 10242 mRNA_1874 0.25 0.6
414,524 + 10242 mRNA_1874 0.35 -0.3
414,555 - 10242 mRNA_1874 0.38 -0.4
414,705 - 10242 mRNA_1874 0.52 0.4
414,834 - 10242 mRNA_1874 0.65 -0.4
414,841 + 10242 mRNA_1874 0.65 0.5
414,977 - 10242 mRNA_1874 0.78 0.4
415,721 + 10243 mRNA_1875 0.30 -1.3