Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1858

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1857: 10225 - KOG2533 Permease of the major facilitator superfamily, at 383950 to 386547 10225 mRNA_1858: 10226 - K19245 JLP1 sulfonate dioxygenase, at 387260 to 388608 10226 mRNA_1859: 10227 - SUPERFAMILY--SSF57997, at 388857 to 391098 10227

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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386,340 - 1.1
386,493 - -0.0
386,504 - 1.8
386,512 + -0.4
386,633 + 0.2
386,658 - 1.4
386,798 + 0.0
386,815 - 1.5
386,821 + 0.1
386,823 + 1.5
386,932 - 0.5
386,952 - 3.7
386,962 - 0.9
386,963 + 2.0
386,966 - -0.8
386,966 - 0.5
386,972 - -0.6
386,974 + -0.1
386,976 - -0.1
387,098 - 0.1
387,128 + 0.6
387,147 + 0.8
387,241 + 0.9
387,286 - 0.5
387,394 - 0.6
387,397 + 10226 mRNA_1858 0.10 0.1
387,532 - 10226 mRNA_1858 0.20 0.3
387,581 - 10226 mRNA_1858 0.24 0.3
388,434 + 10226 mRNA_1858 0.87 -0.3
388,803 - -1.1
389,110 - 10227 mRNA_1859 0.11 0.5
389,157 + 10227 mRNA_1859 0.13 0.4
389,281 - 10227 mRNA_1859 0.19 -0.1
389,515 - 10227 mRNA_1859 0.29 -0.2