Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1807

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1807: 10175 - K09403 FOXJ2_3 forkhead box protein J2/3, at 251136 to 255270 10175

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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250,196 + 1.5
250,201 - 0.9
250,202 - -0.2
250,206 + 1.3
250,336 - -0.6
250,337 + 0.9
250,365 + 0.7
250,494 - 0.2
250,529 - 1.8
250,628 - 1.2
250,642 + -0.0
250,655 - 1.4
250,661 + 0.4
250,661 + -0.9
250,666 - 2.9
250,667 - 0.2
250,669 - 0.8
250,671 + -0.1
250,671 - -0.3
250,671 - 1.2
250,672 - 1.9
250,672 + -0.1
250,676 + 0.6
250,676 + 1.3
250,693 - -0.7
250,693 + 0.4
250,693 + -0.2
250,705 - -0.2
250,706 + 1.5
250,721 - 1.4
250,820 - -0.4
250,824 + 1.0
250,836 + -0.1
250,858 + 0.1
250,871 + 0.3
250,888 - 0.2
250,891 + 0.5
250,938 + 0.2
250,943 - 0.8
250,946 + 0.0
250,949 - 1.2
250,957 - -0.1
250,957 - -0.5
250,976 - 1.0
250,977 - 1.5
250,983 + 0.3
250,984 + 0.2
250,985 + -1.5
250,985 - -0.3
250,987 + -0.4
250,992 - 0.4
251,021 - 0.1
251,027 - -0.1
251,030 + -0.1
251,100 - 2.2
251,106 + 0.7
251,154 - 1.5
251,162 + 0.8
251,171 + 0.5
251,171 - 0.8
251,195 + 1.5
251,291 - 0.7
251,340 + 1.3
252,310 - 10175 mRNA_1807 0.28 0.4
252,310 - 10175 mRNA_1807 0.28 1.9
252,629 + 10175 mRNA_1807 0.36 -0.0
252,931 + 10175 mRNA_1807 0.43 1.9
252,949 - 10175 mRNA_1807 0.44 1.3
252,969 - 10175 mRNA_1807 0.44 -0.1
253,050 - 10175 mRNA_1807 0.46 0.6
253,200 + 10175 mRNA_1807 0.50 0.5
253,505 + 10175 mRNA_1807 0.57 0.1
253,671 - 10175 mRNA_1807 0.61 2.0
253,790 - 10175 mRNA_1807 0.64 1.7
253,820 + 10175 mRNA_1807 0.65 -0.1
253,905 + 10175 mRNA_1807 0.67 0.5
254,150 + 10175 mRNA_1807 0.73 2.7
254,237 - 10175 mRNA_1807 0.75 -0.3
254,524 - 10175 mRNA_1807 0.82 -0.9
254,542 + 10175 mRNA_1807 0.82 -0.2
254,546 + 10175 mRNA_1807 0.82 1.7
254,567 - 10175 mRNA_1807 0.83 1.1
254,950 - 0.7
255,085 + 1.3
255,404 - 0.5
255,419 + 2.7
255,426 + 1.9
255,527 + 0.3
255,681 - 1.6
255,847 - 0.7
255,853 - 0.7
255,854 - 2.2
255,862 + 1.7
255,866 - -0.9
255,880 - -0.6
255,997 - -0.4
256,043 + -0.4
256,161 - -1.5