Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1781

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1781: 10149 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 191396 to 193155 10149 mRNA_1782: 10150 - Hypothetical Protein, at 193433 to 193902 10150

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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190,486 - 0.3
190,487 - 2.8
190,758 + 0.9
190,788 - -0.7
190,792 + 2.0
190,797 - 1.2
190,920 + 2.6
190,923 - -0.9
191,067 - 1.5
191,067 - -0.1
191,225 + -0.7
191,333 - 0.3
191,363 - -0.7
191,518 - -0.4
191,540 + -0.1
191,929 - 10149 mRNA_1781 0.30 0.6
192,403 - 10149 mRNA_1781 0.57 2.0
192,799 + 10149 mRNA_1781 0.80 2.2
192,843 - 10149 mRNA_1781 0.82 -0.1
192,960 + 10149 mRNA_1781 0.89 -1.0
193,067 - 0.8
193,861 + -0.1
193,989 - 0.7